BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011G03LP1|AL426258
(753 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1695 848 0.0
3x_Contig919 537 e-152
>3x_Contig1695
Length = 14630
Score = 848 bits (423), Expect = 0.0
Identities = 441/456 (96%)
Strand = Plus / Minus
Query: 4 gtatgcctccccaagatattcttcggatgagataggccattttacaccattgatttccaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gtatgcctccccaagatattcttcggatgagataggccattttacaccattgatttccaa 400
Query: 64 agaaagtatctcggttgaattacatgggatagcaaaatttgtaccatcggaaacagaatt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 agaaagtatctcggttgaattacatgggatagcaaaatttgtaccatcggaaacagaatt 340
Query: 124 aacgaaaaatgtatgcnaatccaatgcatcttgagtgggtaarattagcagtgtagtacc 183
|||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 339 aacgaaaaatgtatgcaaatccaatgcatcttgagtgggtaaaattagcagtgtagtacc 280
Query: 184 actatcaacaatacccgrtcttatgtvtgadgrttgtgatccagtcacggcctccgaagt 243
||||||||||||||||| |||||||| ||| | |||||||||||||||||||||||||||
Sbjct: 279 actatcaacaatacccgatcttatgtatgaagattgtgatccagtcacggcctccgaagt 220
Query: 244 cgagarattcacagcttgtgaattgacgtaaacrctatcaattttcaactgccaatratg 303
||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct: 219 cgagaaattcacagcttgtgaattgacgtaaacactatcaattttcaactgccaataatg 160
Query: 304 gttttcatttgttatcaatgaagcgtaatgaatatcaccagtgtacaaatcctctactaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 gttttcatttgttatcaatgaagcgtaatgaatatcaccagtgtacaaatcctctactaa 100
Query: 364 rtcgccaatvatarrcagccctttattttccgtcaaaggagcttgtgaggcagaatcctc 423
|||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 99 atcgccaataataaacagccctttattttccgtcaaaggagcttgtaaggcagaatcctc 40
Query: 424 tgatgtagtgttatcttttgavttaagagcgccaat 459
||||||||||||||||||||| ||||||||||||||
Sbjct: 39 tgatgtagtgttatcttttgaattaagagcgccaat 4
>3x_Contig919
Length = 4576
Score = 537 bits (268), Expect = e-152
Identities = 288/292 (98%), Gaps = 2/292 (0%)
Strand = Plus / Plus
Query: 462 tcagtgagaatttctccatggatatggcgttggattcgcttaagactgatatgatactct 521
||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 1 tcagtgaga-tttctccatggatatggcgttg-attcgcttaaaactgatatgatactct 58
Query: 522 ctatgttgtccgagttattggatggcaacccaaagataccactaactggataattctcaa 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 ctatgttgtccgagttattggatggcaacccaaagataccactaactggataattctcaa 118
Query: 582 aaatatcgggcacctcatttgcaacaccaaaggtaaaattctgagtggttgccaacttat 641
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 aaatatcggacacctcatttgcaacaccaaaggtaaaattctgagtggttgccaacttat 178
Query: 642 tcacaataattctatcctcatagacgtcaccagaggcagttccagagctgtagatcaacg 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 tcacaataattctatcctcatagacgtcaccagaggcagttccagagctgtagatcaacg 238
Query: 702 aaaaagtagattcatcggctgctctcttgacgttatctgtagaaaacaattt 753
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 aaaaagtagattcatcggctgctctcttgacgttatctgtagaaaacaattt 290
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4484
Number of Sequences: 1807
Number of extensions: 4484
Number of successful extensions: 89
Number of sequences better than 1.0e-20: 2
length of query: 753
length of database: 10,358,551
effective HSP length: 16
effective length of query: 737
effective length of database: 10,329,639
effective search space: 7612943943
effective search space used: 7612943943
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)